Cell Trajectory Inference based on Optimal Transport and a mechanistic stochastic gene expression model
Clémence Fournié, Elias Ventre, Ulysse Herbach, Aymeric Baradat, Olivier Gandrillon, Fabien Crauste A
This paper introduces a method for cell trajectory inference using optimal transport with a mechanistic stochastic gene expression model, showing the Bursty model better captures gene dynamics than the Diffusive model.
npj Systems Biology and Applications · May 21, 2026Peer-reviewedSystems Biology