Author

Ricardo Iván Alcalá-Briseño

Oregon State UniversityORCID 0000-0002-7031-2195Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Ecology· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Research Focus:variant calling· 1 Assay:whole-genome sequencing· 1

Frequent Co-Authors

Alexandra J. WeisbergiD· 1 shared Camilo H. Parada-RojasiD· 1 shared Cu Thi Le Thuy· 1 shared Erik DelaquisiD· 1 shared Fernanda Iruegas-BocardoiD· 1 shared Hung Phan· 1 shared James Peter LeggiD· 1 shared Jeff H. ChangiD· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperBioinformatics

Alexandra J. WeisbergORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 31, 2025

PathogenSurveillance: an automated pipeline for population genomic analyses and pathogen identification

Zachary Foster, Martha A. Sudermann, Camilo H. Parada-Rojas…·Niklaus J. Grünwald

PathogenSurveillance automates population genomic analyses of WGS data to enable rapid pathogen identification and biosurveillance.

3 citations

whole-genome sequencingexperimental assay

𝕏 PostBluesky

EcologyAgricultural SystemsPeer-reviewedJul 15, 2025

Decision support for managing an invasive pathogen through efficient clean seed systems: Cassava mosaic disease in Southeast Asia

Kelsey F Andersen, Erik Delaquis, Jonathan Newby…·Karen A. Garrett

This paper develops a decision-support framework to manage cassava mosaic disease by integrating environmental risk, seed exchange data, and whitefly spread to prioritize seed system interventions.

5 citations

statistical model

𝕏 PostBluesky