Author

Deniz Yüret

Koç UniversityORCID 0000-0002-7039-0046Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:protein structure· 2 Research Focus:protein structure prediction· 2 Approach:deep learning· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

A.T. Balci· 1 shared Asma HakouziD· 1 shared Attila GürsoyiD· 1 shared Aysima HacisuleymaniD· 1 shared Burak ErmaniD· 1 shared Can Gümeli· 1 shared Özlem KeskiniD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

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7 top collaborators · 11 mutual co-author links

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1 shared paperBioinformatics

A.T. Balci

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2 papers

Recent·Most cited

BioinformaticsJournal of Molecular BiologyPeer-reviewedMar 8, 2025

Dynamic Coupling and Entropy Changes in KRAS G12D Mutation: Insights into Molecular Flexibility, Allostery and Function

Aysima Hacisuleyman, Deniz Yüret, Burak Erman

This study uses molecular dynamics simulations to show how the G12D mutation in KRAS increases entropy and dynamic coupling, altering its conformational landscape and function.

5 citations

humanprotein structure

𝕏 PostBluesky

BioinformaticsbioRxivPreprintApr 24, 2019

DeepInterface: Protein-protein interface validation using 3D Convolutional Neural Networks

A.T. Balci, Can Gümeli, Asma Hakouz…·Attila Gürsoy

DeepInterface predicts whether a protein complex interface is true using 3D CNNs, achieving 88% accuracy on validation data.

10 citations

protein structuredeep learning

𝕏 PostBluesky