Author

Majid Mohammadi

Utrecht UniversityORCID 0000-0002-7131-8724Unclaimed ORCID profile · follow to get notified of new preprints

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Majid Mohammadi3 papers

Biology Disciplines

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Bioinformatics· 1

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Assay:proteomics· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

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Fabrice Kusters· 1 shared Grigory ReznikoviD· 1 shared Henk van den ToorniD· 1 shared Pavel G. SinitcyniD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

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1 shared paperBioinformatics

Fabrice Kusters

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1 paper

Recent·Most cited

BioinformaticsJournal of Proteome ResearchPeer-reviewedAug 18, 2026

Protein Language Model Decoys for Target Decoy Competition in Proteomics: Quality Assessment and Benchmarks

Grigory Reznikov, Fabrice Kusters, Majid Mohammadi…·Pavel G. Sinitcyn

This paper introduces a protein language model-based decoy generation method for proteomics and benchmarks it against classical decoy strategies, finding it less distinguishable by neural networks but not superior in search performance.

DOI 10.1021/acs.jproteome.6c00302

proteomicsdeep learning

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