Author

Xinyi Lin

Agency for Science, Technology and ResearchORCID 0000-0002-7209-6588Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:gene regulatory network inference· 1 Research Focus:GWAS / association mapping· 1 Assay:GWAS summary statistics· 1 Assay:scRNA-seq· 1 Approach:statistical model· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Can YangiD· 1 shared Danqing YiniD· 1 shared Hongyu DongiD· 1 shared Huidong Su· 1 shared Jian HuangiD· 1 shared Jin LiuiD· 1 shared Joshua W. K. HoiD· 1 shared Ke NiiD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperBioinformatics

Can YangORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJul 15, 2025

AtlasAgent: Vision language model and Agent-guided Framework for Evaluation of Atlas-scale Single-cell Integration

Danqing Yin, Zhongmin Zhang, Xinci Liu…·Joshua W. K. Ho

AtlasAgent uses a vision-language model to rapidly evaluate large-scale single-cell data integration, outperforming traditional methods in speed and efficiency.

DOI 10.1101/2025.07.15.663271

scRNA-seqdeep learning

𝕏 PostBluesky

BioinformaticsBioinformaticsPeer-reviewedNov 21, 2019

CoMM-S2: a collaborative mixed model using summary statistics in transcriptome-wide association studies

Yi Yang, Xingjie Shi, Yuling Jiao…·Jin Liu

CoMM-S2 uses GWAS summary statistics to infer mechanistic roles of genetic variants in gene expression, achieving performance comparable to methods using individual-level data.

33 citations

GWAS summary statisticsstatistical model

𝕏 PostBluesky