Mathias Goncalves

fMRIPrep Lifespan: Extending A Robust Pipeline for Functional MRI Preprocessing to Developmental Neuroimaging

The paper extends fMRIPrep to handle MRI data from infancy to old age, demonstrating high-quality preprocessing across a wide age range.

TemplateFlow: FAIR-sharing of multi-scale, multi-species brain models

TemplateFlow provides a FAIR framework for sharing and managing multi-scale, multi-species brain models to improve reproducibility in neuroimaging.

OpenNeuro: An open resource for sharing of neuroimaging data

OpenNeuro is an open archive for sharing brain imaging data following FAIR principles, hosting over 600 datasets from 20,000 participants across species and modalities, with over 150 publications citing its data.

Analysis of task-based functional MRI data preprocessed with fMRIPrep

This paper introduces fMRIPrep, a tool for preprocessing task-based fMRI data, and demonstrates its integration into a workflow for statistical analysis.

LittleBrain: a gradient-based tool for the topographical interpretation of cerebellar neuroimaging findings

LittleBrain visualizes cerebellar neuroimaging data along newly identified functional gradients to enhance topographical interpretation.

FMRIPrep: a robust preprocessing pipeline for functional MRI

fMRIPrep, a BIDS-driven, self-adapting fMRI preprocessing pipeline, earned above-acceptable expert quality ratings on 50 of 54 OpenfMRI datasets and introduced less smoothing than FSL feat.