Author

David F. Abbott

The University of MelbourneORCID 0000-0002-7259-8238Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:imaging· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Approach:experimental assay· 1

Frequent Co-Authors

Chris TailbyiD· 3 shared David N. VaughaniD· 3 shared Graeme D. JacksoniD· 3 shared Bahman TahayoriiD· 2 shared Heath PardoeiD· 2 shared Vicky HeiD· 2 shared Aina PuceiD· 1 shared Akshaiy Narayanan· 1 shared

Activity by Year

2024-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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3 shared papersNeuroscience

Chris TailbyORCID

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Author profile →

4 papers

Recent·Most cited

Multilayer Network Modelling of the Human Reading System

Vicky He, Mangor Pedersen, David N. Vaughan, Heath Pardoe, Jodie E. Chapman, Graeme D. Jackson, David F. Abbott, Chris Tailby

The paper uses multilayer network modelling to analyze fMRI data and shows that reading ability correlates with specific dynamic interactions within the reading network, particularly involving the left fusiform gyrus and inferior frontal gyrus.

bioRxiv · Jan 20, 2026 · PreprintNeuroscience

Robust-tedana: An automated denoising pipeline for multi-echo fMRI data

Bahman Tahayori, Robert Elton Smith, David N. Vaughan, Chris Tailby, Daniel A. Handwerker, Eric Y. Pierre, Graeme D. Jackson, David F. Abbott

Robust-tedana improves automated denoising of multi-echo fMRI data, enhancing both single-subject and group-level analysis accuracy.

bioRxiv · Jun 16, 2025 · PreprintBioengineering

Common pitfalls during model specification in psychophysiological interaction analysis

Vicky He, Bahman Tahayori, David N. Vaughan, Heath Pardoe, Graeme D. Jackson, Chris Tailby, David F. Abbott, the Australian Epilepsy Project Investigators

This paper identifies and corrects common methodological issues in psychophysiological interaction analysis that compromise model validity.

Imaging Neuroscience · Jan 1, 2025Peer-reviewedNeuroscience

Neurodesk: An accessible, flexible, and portable data analysis environment for reproducible neuroimaging

Angela Renton, Thuy Thanh Dao, Tom Johnstone, Oren Civier, Ryan P. Sullivan, David White, Paris Lyons, Benjamin Slade, David F. Abbott, Toluwani Joan Amos, Saskia Bollmann, Andy Botting, Megan E. J. Campbell, Jeryn Chang, Thomas Close, , Steffen Bollmann

Neurodesk provides a portable and reproducible neuroimaging analysis platform using software containers to enable accessible and flexible data analysis pipelines.

Nature Methods · Jan 8, 2024Peer-reviewedNeuroscience