Author

Jiayi Zhao

Yale UniversityORCID 0000-0002-7271-4796Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:deconvolution· 1 Approach:machine learning (classical)· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

A. JustetiD· 1 shared Amei AmeiiD· 1 shared Gang XuiD· 1 shared Iván O. RosasiD· 1 shared Ji QiiD· 1 shared Naftali KaminskiiD· 1 shared Nating WangiD· 1 shared Ningshan LiiD· 1 shared

Activity by Year

2023-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperBioinformatics

A. JustetORCID

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1 paper

Recent·Most cited

A hybrid machine learning and regression method for cell type deconvolution of spatial barcoding-based transcriptomic data

Yunqing Liu, Ningshan Li, Ji Qi, Gang Xu, Jiayi Zhao, Nating Wang, Xiayuan Huang, Wenhao Jiang, A. Justet, Taylor Sterling Adams, Robert Homer, Amei Amei, Iván O. Rosas, Naftali Kaminski, Zuoheng Wang, Xiting Yan

SDePER improves cell type deconvolution in spatial transcriptomic data by addressing platform effects, sparsity, and spatial correlation, achieving more accurate results than existing methods.

bioRxiv · Aug 24, 2023 · PreprintBioinformatics