Author

Simone Carpanzano

University of PaviaORCID 0000-0002-7302-8544Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 2 Approach:experimental assay· 2 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Organism:human· 1 Organism:mouse· 1

Frequent Co-Authors

Francesco LescaiiD· 3 shared Mariangela SantorsolaiD· 3 shared Adly M. M. Abd‐AllaiD· 1 shared Anna Cleta CroceiD· 1 shared Anna Rodolfa MalacridaiD· 1 shared Chantel Janet de BeeriD· 1 shared Davide BagordoiD· 1 shared Fabian GstöttenmayeriD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersBioinformatics

Francesco LescaiORCID

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3 papers

Recent·Most cited

Eduomics: a Nextflow pipeline to simulate -omics data for education

Lorenzo Sola, Davide Bagordo, Simone Carpanzano, Mariangela Santorsola, Francesco Lescai

Eduomics is a Nextflow pipeline that simulates genomic and transcriptomic data for educational purposes, providing realistic clinical scenarios to enhance bioinformatics learning.

NAR Genomics and Bioinformatics · Jan 6, 2026Peer-reviewedBioinformatics

Spiroplasma impairs testes gene expression in Glossina fuscipes fuscipes

Riccardo Piccinno, Giulia Fiorenza, Francesco Lescai, Simone Carpanzano, Fabian Gstöttenmayer, Kiswend‐sida M. Dera, Anna Cleta Croce, Chantel Janet de Beer, Mariangela Santorsola, Giuliano Gasperi, Federico Forneris, Adly M. M. Abd‐Alla, Serap Aksoy, Anna Rodolfa Malacrida

This study examines the impact of Spiroplasma infection on testes gene expression in G. f. fuscipes, finding significant downregulation of genes related to sperm motility and energy metabolism.

bioRxiv · Sep 23, 2025 · PreprintGenomics

hgtseq: a standard pipeline to study horizontal gene transfer

Simone Carpanzano, Mariangela Santorsola, nf-core community, Francesco Lescai

hgtseq is a pipeline for analyzing horizontal gene transfer from sequencing data, showcasing its performance on mammalian exome datasets.

International Journal of Molecular Sciences · Nov 22, 2022Peer-reviewedBioinformatics