Author

Marissa Vignali

Adaptive Biotechnologies (United States)ORCID 0000-0002-7319-3371Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Organism:human· 2 Assay:proteomics· 2 Approach:statistical model· 2 Research Focus:gene regulatory network inference· 1 Assay:long-read sequencing· 1 Approach:machine learning (classical)· 1 Assay:whole-exome sequencing· 1

Frequent Co-Authors

Harlan S. RobinsiD· 2 shared Alexandra SnyderiD· 1 shared Arun AhujaiD· 1 shared Bülent Arman AksoyiD· 1 shared Christopher S. Carlson· 1 shared Cindy Desmarais· 1 shared Dean F. BajoriniD· 1 shared Elaine R. MardisiD· 1 shared

Activity by Year

2015-2017 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersGenomics

Harlan S. RobinsORCID

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2 papers

Recent·Most cited

Contribution of systemic and somatic factors to clinical response and resistance in urothelial cancer: an exploratory multi-omic analysis

Alexandra Snyder, Tavi Nathanson, Samuel Aaron Funt, Arun Ahuja, Jacqueline L. Buros, Matthew David Hellmann, Eliza Chang, Bülent Arman Aksoy, Hikmat A Al‐Ahmadie, Erik C. Yusko, Marissa Vignali, Sharon Benzeno, Mariel Elena Boyd, Meredith Maisie Moran, Gopa Iyer, , Dean F. Bajorin

This study explores factors influencing response and resistance to atezolizumab in urothelial cancer using multi-omic data, finding associations between TCR clonality and clinical outcomes.

PLoS Medicine · May 26, 2017Peer-reviewedGenomics

Immunosequencing reveals diagnostic signatures of chronic viral infection in T cell memory

Ryan O. Emerson, William S. DeWitt, Marissa Vignali, Jenna Gravley, Cindy Desmarais, Christopher S. Carlson, John A. Hansen, Mark Rieder, Harlan S. Robins

The paper identifies public TCR signatures that accurately distinguish CMV infection status using immunosequencing and machine learning, with a large dataset of TCR sequences.

bioRxiv · Sep 11, 2015 · PreprintGenomics