Fang Du

Transcriptomics uncovers molecular mechanisms underlying salt-inhibited root growth in Festuca rubra

This study identifies 68,062 differentially expressed genes in Festuca rubra under salt stress, revealing molecular mechanisms linking stress adaptation to root growth suppression and ion homeostasis.

rcCAE: a convolutional autoencoder method for detecting intra-tumor heterogeneity and single-cell copy number alterations

rcCAE uses a convolutional autoencoder to detect intra-tumor heterogeneity and single-cell copy number alterations from scDNA-seq data, outperforming existing methods in simulated and real datasets.