Author

Craig Gin

North Carolina State UniversityORCID 0000-0002-7447-663XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genomics· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:statistical model· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Assay:metagenomics· 1 Organism:mouse· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Benjamin J. CallahaniD· 2 shared Breck A. DuerkopiD· 2 shared Jessie L. MaieriD· 2 shared Manuel KleineriD· 2 shared Avery M. Bass· 1 shared Emma K. SheriffiD· 1 shared Jorden T. RabascoiD· 1 shared Wynter Spencer· 1 shared

Activity by Year

2024-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 32 mutual co-author links

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2 shared papersGenomics

Benjamin J. CallahanORCID

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2 papers

Recent·Most cited

TrIdent - An R package to automate transductomics analysis of virus-like particle mediated DNA mobilization

Jessie L. Maier, Craig Gin, Jorden T. Rabasco, Yixuan Yang, Avery M. Bass, Wynter Spencer, Breck A. Duerkop, Benjamin J. Callahan, Manuel Kleiner

TrIdent automates transductomics analysis by identifying DNA mobilized by virus-like particles, showing high agreement with manual classifications and revealing enriched bacterial families in murine gut transductomes.

Microbiome · Sep 16, 2026Peer-reviewedGenomics

Pseudo-pac site sequences used by phage P22 in generalized transduction of Salmonella

Jessie L. Maier, Craig Gin, Benjamin J. Callahan, Emma K. Sheriff, Breck A. Duerkop, Manuel Kleiner

This study identifies pseudo-pac site sequences in Salmonella genomes that enable P22 phage to initiate generalized transduction, using bioinformatics analysis of sequencing data.

PLoS Pathogens · Jun 24, 2024Peer-reviewedMicrobiology