Author

Mark T. Østerlund

Statens Serum InstitutORCID 0000-0002-7707-3940Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Organism:E. coli· 1 Approach:experimental assay· 1 Approach:statistical model· 1

Frequent Co-Authors

Kristoffer KiiliD· 2 shared Kim Lee NgiD· 1 shared Marc SteggeriD· 1 shared Paal Skytt AnderseniD· 1 shared Thor Bech JohanneseniD· 1 shared

Activity by Year

2018-2018 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 10 mutual co-author links

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2 shared papersBioinformatics

Kristoffer KiilORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMay 9, 2018

CleanRecomb, a quick tool for recombination detection in SNP based cluster analysis

Mark T. Østerlund, Kristoffer Kiil

CleanRecomb filters SNP matrices to identify recombination events by detecting regions with elevated SNP density in E. coli genomes.

5 citations

E. coliwhole-genome sequencing

BioinformaticsbioRxivPreprintFeb 15, 2018

ReadFilter - Filtering reads of interest for quicker downstream analysis

Kim Lee Ng, Thor Bech Johannesen, Mark T. Østerlund…·Marc Stegger

ReadFilter filters reads against user-specified sequences to reduce analysis time while maintaining accuracy, improving mapping and assembly efficiency.

DOI 10.1101/266080

whole-genome sequencingexperimental assay