Author

Aristeidis Tsaris

Oak Ridge National LaboratoryORCID 0000-0002-7734-3349Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:deep learning· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:drug response / drug discovery· 1 Assay:imaging· 1 Organism:plant (other)· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Anand SeethepalliiD· 1 shared Andrew E. BlanchardiD· 1 shared Debsindhu BhowmikiD· 1 shared Feiyi WangiD· 1 shared Isaac LyngaasiD· 1 shared Janou Milligan· 1 shared Jens GläseriD· 1 shared John H. LagergreniD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperPlant Biology

Anand SeethepalliORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

Vision Transformers Enable Advanced Plant Phenotyping in Controlled Environments

Janou Milligan, Anand Seethepalli, Aristeidis Tsaris, Xiao Wang, Larry M. York, John H. Lagergren

This paper compares segmentation methods for plant phenotyping, finding that pretrained vision transformers outperform color thresholding and supervised U-Nets in generalization across species and conditions.

bioRxiv · Sep 10, 2026 · PreprintPlant Biology

Language Models for the Prediction of SARS-CoV-2 Inhibitors

Andrew E. Blanchard, John P. Gounley, Debsindhu Bhowmik, Mayanka Chandrashekar, Isaac Lyngaas, Shang Bing Gao, Junqi Yin, Aristeidis Tsaris, Feiyi Wang, Jens Gläser

This paper uses deep learning language models to predict SARS-CoV-2 inhibitors by generating and scoring drug candidates based on protein binding affinity.

The International Journal of High Performance Computing Applications · Oct 7, 2022Peer-reviewedBioinformatics