Author

Jiawang Tao

Chinese Academy of SciencesORCID 0000-0002-7905-5594Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Research Focus:gene regulatory network inference· 3 Approach:machine learning (classical)· 3 Assay:scRNA-seq· 3 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Research Focus:differential expression· 1

Frequent Co-Authors

Jie WangiD· 2 shared Andrei-Florian StoicaiD· 1 shared Cuicui Xia· 1 shared Jack Chung-Kai YuiD· 1 shared Jiang X. QianiD· 1 shared Jinlian LiiD· 1 shared Jiongliang WangiD· 1 shared Junyao JiangiD· 1 shared

Activity by Year

2022-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 17 mutual co-author links

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2 shared papersCell Biology

Jie WangORCID

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3 papers

Recent·Most cited

Cell BiologybioRxivPreprintNov 25, 2025

An Integrated Single-Cell Atlas Reveals Hepatic Stellate Cell Heterogeneity and Spatiotemporal Dynamics after Liver Injury

Jiongliang Wang, Jiawang Tao, Cuicui Xia…·Jie Wang

This study constructs a cross-etiological HSC atlas to reveal HSC heterogeneity and spatiotemporal dynamics in liver injury, identifying a novel apoptosis-prone HSC subtype and a 531-gene fibrosis signature.

DOI 10.1101/2025.11.25.690307

mousehuman

BioinformaticsbioRxivPreprintFeb 17, 2022

AGEAS: Automated Machine Learning based Genetic Regulatory Element Extraction System

Masayoshi Nakamoto, Jiawang Tao, Jack Chung-Kai Yu

AGEAS extracts gene regulatory elements and reconstructs gene regulatory networks using semi-supervised AutoML, demonstrating effectiveness across diverse biological phenomena.

DOI 10.1101/2022.02.17.480852

scRNA-seqmachine learning (classical)

BioinformaticsiSciencePeer-reviewedJan 1, 2022

IReNA: integrated regulatory network analysis of single-cell transcriptomes

Junyao Jiang, Pin Lyu, Jinlian Li…·Jie Wang

IReNA integrates scRNA-seq and scATAC-seq data to infer regulatory networks, outperforming existing methods in identifying known regulators.

40 citations

scRNA-seqscATAC-seq