Author
Pin Lyu
Johns Hopkins UniversityORCID 0000-0002-9996-826XUnclaimed ORCID profile · follow to get notified of new preprints
Additional preprints under this name without ORCID
Biology Disciplines
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2021-2026 · peak 3/yrCo-Author Collaboration Network
10 top collaborators · 35 mutual co-author links10 papers
Recent·Most cited
- NeuroscienceeLifePeer-reviewed
- NeurosciencebioRxivPreprint
Comparative single-cell multiomic analysis reveals evolutionarily conserved and species-specific cellular mechanisms mediating natural retinal aging.
Pin Lyu, Isabella Palazzo, Yang Oh Jin…·Seth Blackshaw
The paper identifies conserved and species-specific aging mechanisms in retinal cells across zebrafish, mice, and humans using single-cell multi-omics analyses.
- Molecular BiologyGenes & DevelopmentPeer-reviewed
SUMO2 Promotes Histone Pre-mRNA Processing by Stabilizing Histone Locus Body Interactions and Facilitating U7 snRNP Assembly
Shuying He, Pin Lyu, Marnie W. Skinner…·Michael J. Matunis
This study shows SUMO2 stabilizes HLB interactions and facilitates U7 snRNP assembly, preventing histone mRNA polyadenylation.
- NeuroscienceNature CommunicationsPeer-reviewed
Common and divergent gene regulatory networks control injury-induced and developmental neurogenesis in zebrafish retina.
Pin Lyu, María Iribarne, Dmitri Serjanov…·Seth Blackshaw
The paper compares gene regulatory networks in zebrafish retinal regeneration and development after different neuronal subtype losses, finding both similarities and differences.
- Developmental BiologyDevelopmental CellPeer-reviewed
Multi-omic Analysis of Developing Human Retina and Organoids Reveals Cell-Specific Cis-Regulatory Elements and Mechanisms of Non-Coding Genetic Disease Risk.
Eric D. Thomas, Andrew E. Timms, Sarah Giles…·Timothy J. Cherry
The paper identifies cell-class-specific cis-regulatory elements in human retina and organoids, showing their correlation and function in development and disease.
85 citationstop 2% - BioinformaticsbioRxivPreprint
LRLoop: Feedback loops as a design principle of cell-cell communication
Ying Xin, Pin Lyu, Junyao Jiang…·Jiang X. Qian
LRLoop identifies bidirectional ligand-receptor feedback loops in cell-cell communication, reducing false positives and revealing new interactions in retinal development.
- BioinformaticsiSciencePeer-reviewed
IReNA: integrated regulatory network analysis of single-cell transcriptomes
Junyao Jiang, Pin Lyu, Jinlian Li…·Jie Wang
IReNA integrates scRNA-seq and scATAC-seq data to infer regulatory networks, outperforming existing methods in identifying known regulators.
40 citations - NeuroscienceCell ReportsPeer-reviewed
Gene regulatory networks controlling temporal patterning, neurogenesis and cell fate specification in the mammalian retina.
Pin Lyu, Thanh V. Hoang, Clayton P. Santiago…·Seth Blackshaw
This study identifies gene regulatory networks controlling retinal development by integrating single-cell RNA and ATAC-seq data from mouse and human retinas, revealing transcription factors that regulate temporal patterning and cell fate.
- NeuroscienceScience AdvancesPeer-reviewed
Control of neurogenic competence in mammalian hypothalamic tanycytes.
Sooyeon Yoo, Juhyun Kim, Pin Lyu…·Seth Blackshaw
This study identifies NFI factors as repressors of tanycyte-derived neurogenesis and shows their disruption promotes proliferation and neurogenesis in the hypothalamus.