Author

Jenifer Monks

University of Colorado AnschutzORCID 0000-0002-7990-3389Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Developmental Biology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 1 Approach:deep learning· 1 Assay:imaging· 1 Organism:mouse· 1

Frequent Co-Authors

Cassidy J Nicks· 1 shared Colin RF MonksiD· 1 shared Kiarra CogeriD· 1 shared Sarah A Fester· 1 shared Takayoshi InoueiD· 1 shared Yukiko InoueiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

6 top collaborators · 15 mutual co-author links

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1 shared paperDevelopmental Biology

Cassidy J Nicks

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1 paper

Recent·Most cited

MyoNet and AlveoliNet: A hybrid 3D neural-net pipeline for the instance segmentation and scoring of epithelial cells in intact mammary alveoli

Colin RF Monks, Sarah A Fester, Cassidy J Nicks, Kiarra Coger, Yukiko Inoue, Takayoshi Inoue, Jenifer Monks

The paper introduces two 3D neural networks for segmenting and scoring epithelial cells in cleared mammary tissue, demonstrating their use in quantifying myoepithelial cell proportions during pregnancy-lactation transitions.

bioRxiv · Jul 27, 2026 · PreprintDevelopmental Biology