Author

Andrew R. Whiteley

University of MontanaORCID 0000-0002-8159-6381Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Research Focus:genome assembly· 2 Organism:zebrafish· 2 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Research Focus:variant calling· 1

Frequent Co-Authors

Jaanus SuurväliiD· 2 shared Maria LeptiniD· 2 shared Thomas WieheiD· 2 shared Anne‐Marie Flores· 1 shared Ben F. KoopiD· 1 shared Brian E. ScheffleriD· 1 shared Craig WellsiD· 1 shared Geoffrey C. WaldbieseriD· 1 shared

Activity by Year

2019-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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2 shared papersGenetics

Jaanus SuurväliORCID

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3 papers

Recent·Most cited

The genome assembly of the westslope cutthroat trout, Oncorhynchus lewisi, reveals interspecific chromosomal rearrangements with the rainbow trout

Anne‐Marie Flores, Kris A. Christensen, Theresa Godin, Yniv Palti, Matthew R. Campbell, Geoffrey C. Waldbieser, Sheron Simpson, Brian E. Scheffler, Seth R. Smith, Andrew R. Whiteley, Ryan P. Kovach, Gordon Luikart, Matthew C Boyer, Marty D. Kardos, Scott Relyea, , Ben F. Koop

This study produces a chromosomal-level genome assembly for westslope cutthroat trout and identifies interspecific chromosomal rearrangements with rainbow trout.

G3 Genes Genomes Genetics · Mar 19, 2025Peer-reviewedGenomics

Copy number variation and population-specific immune genes in the model vertebrate zebrafish

Yannick Schäfer, Katja Palitzsch, Maria Leptin, Andrew R. Whiteley, Thomas Wiehe, Jaanus Suurväli

The paper analyzes NLR gene copy number variation and population-specific immune genes in zebrafish, finding significant differences between wild and laboratory strains.

eLife · Jun 4, 2024Peer-reviewedGenetics

The laboratory domestication of zebrafish: from diverse populations to inbred substrains

Jaanus Suurväli, Andrew R. Whiteley, Yichen Zheng, Karim Gharbi, Maria Leptin, Thomas Wiehe

This study compares genetic diversity between wild and laboratory zebrafish strains using RAD-seq, finding higher diversity in wild populations and distinct patterns in different regions.

Molecular Biology and Evolution · Dec 4, 2019Peer-reviewedGenetics