Nanopore- and AI-empowered microbial viability inference
Harika Ürel, Sabrina Benassou, Hanna Marti, Tim Reska, Ela Sauerborn, Yuri Pinheiro Alves de Souza, Albert Perlas, Enrique Rayo, Michael Biggel, Stefan Kesselheim, Nicole Borel, Edward J Martin, Constanza B. Venegas, Michael Schloter, Kathrin Schröder, , Lara Urban
This paper introduces a computational framework using nanopore sequencing and deep learning to infer microbial viability from raw signal data, showing high accuracy in controlled and real-world applications.
GigaScience · Jan 1, 2025Peer-reviewedBioinformatics