BioinformaticsPLoS ONEPeer-reviewed
Backward compatibility of whole genome sequencing data with MLVA typing using a new MLVAtype shiny application: the example of Vibrio cholerae
Jérôme Ambroise, Léonid M. Irenge, Jean-François Durant…·Jean‐Luc Gala
The paper introduces MLVAType, a tool that extracts MLVA profiles from WGS data while maintaining compatibility with traditional MLVA methods, and identifies limitations in k-mer size affecting accuracy.