Author

Daniel Hakim

University of California San DiegoORCID 0000-0002-8467-5413Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Assay:metagenomics· 2 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:differential expression· 1 Approach:statistical model· 1

Frequent Co-Authors

Gibraan RahmaniD· 2 shared Rob D. KnightiD· 2 shared Amanda Hazel DilmoreiD· 1 shared Antonio GonzáleziD· 1 shared Brent NowinskiiD· 1 shared Caitlin GuccioneiD· 1 shared Cameron MartinoiD· 1 shared Celeste AllabandiD· 1 shared

Activity by Year

2022-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Gibraan RahmanORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 30, 2023

BIRDMAn: A Bayesian differential abundance framework that enables robust inference of host-microbe associations

Gibraan Rahman, James T. Morton, Cameron Martino…·Rob D. Knight

BIRDMAn is a Bayesian framework for differential abundance analysis in microbiome studies, showing improved statistical power and detecting antibiotic effects and cancer classifiers.

17 citations

metagenomicsBayesian inference

𝕏 PostBluesky

BioinformaticsbioRxivPreprintMay 19, 2022

Scalable power analysis and effect size exploration of microbiome community differences with Evident

Gibraan Rahman, Daniel T. McDonald, Antonio González…·Rob D. Knight

Evident calculates effect sizes and performs power analysis for microbiome community differences, scaling to large datasets with many metadata covariates.

8 citations

metagenomicsstatistical model

𝕏 PostBluesky