Author

Clair A. Huffine

University of Colorado BoulderORCID 0000-0002-8471-905XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biochemistry· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Assay:fluorescence / live-cell microscopy· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Assay:imaging· 1 Approach:machine learning (classical)· 1 Approach:microscopy & imaging analysis· 1

Frequent Co-Authors

Jeffrey C. CameroniD· 2 shared Anton P. AvramoviD· 1 shared Catherine G. FontanaiD· 1 shared Christian M. BriningeriD· 1 shared Colin SempeckiD· 1 shared Jian Wei TayiD· 1 shared Rosanna L. Garris· 1 shared Zachary L. MaasiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

9 top collaborators · 20 mutual co-author links

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2 shared papersBiochemistry

Jeffrey C. CameronORCID

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2 papers

Recent·Most cited

BiochemistryCommunications BiologyPeer-reviewedMay 4, 2026

Cyanobacteria form a procarboxysome-like structure in response to high CO2

Clair A. Huffine, Catherine G. Fontana, Rosanna L. Garris…·Антон Аврамов

The paper tracks redox states in cyanobacteria under different CO2 conditions, finding that procarboxysome-like structures form in high CO2, suggesting a more permeable shell is advantageous.

8 citationstop 2%

fluorescence / live-cell microscopymicroscopy & imaging analysis

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MicrobiologyPhotosynthesis ResearchPeer-reviewedFeb 1, 2025

Machine Learning Models for Segmentation and Classification of Cyanobacterial Cells

Clair A. Huffine, Zachary L. Maas, Anton P. Avramov…·Jian Wei Tay

The paper develops ML models for segmenting and classifying cyanobacterial cells, showing improved performance over traditional methods in dense colonies and artifact resistance.

2 citations

imagingfluorescence / live-cell microscopy

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