Nishat Anjum Bristy

The paper estimates the number of mutations needed to reconstruct clonal lineage trees from large datasets, showing that modest mutation counts suffice for accurate reconstruction.

This paper introduces TUSV-int, a method that integrates bulk DNA-seq and scRNA-seq to improve deconvolution and phylogenetic inference for cancer clonal structure.

The paper introduces an alignment-free method for phylogenetic distance estimation under a no-strand bias model, showing high accuracy in simulations and real data.