Author

Alberto Casagrande

University of UdineORCID 0000-0002-8681-1482Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Research Focus:genome assembly· 1 Research Focus:phylogenetics / evolution· 1

Frequent Co-Authors

Elena BuscaroliiD· 2 shared Elena RivaroliiD· 2 shared Giulio CaravagnaiD· 2 shared Salvatore MiliteiD· 2 shared Alberto CazzanigaiD· 1 shared Alessio AnsuiniiD· 1 shared Alice Antonello· 1 shared Andrea SottorivaiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersBioinformatics

Elena BuscaroliORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJun 11, 2026

Tumour evolution as ground truth for cancer whole-genome sequencing

Valeriani Lucrezia, Giorgia Gandolfi, Elena Buscaroli…·Giulio Caravagna

This paper introduces SCOUT, a synthetic whole-genome sequencing resource for benchmarking cancer genomic analysis, revealing performance issues in complex tumours and highlighting the importance of evolutionary ground truth.

DOI 10.64898/2026.06.09.731105

humanwhole-genome sequencing

𝕏 PostBluesky

Cancer BiologybioRxivPreprintMar 31, 2025

Model-based tumour subclonal deconvolution accounting for spatio-temporal sampling biases

Elena Rivaroli, Elena Buscaroli, Salvatore Milite…·Giulio Caravagna

This paper introduces MOBSTERm, a Bayesian framework for subclonal deconvolution that accounts for spatio-temporal sampling biases in cancer sequencing data, improving the analysis of tumour evolution.

1 citation

humanwhole-genome sequencing

𝕏 PostBluesky