Author

Can Keşmir

Utrecht UniversityORCID 0000-0002-8756-1171Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:Bayesian inference· 1 Research Focus:benchmarking· 1 Research Focus:gene regulatory network inference· 1 Assay:metagenomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Bas E. DutilhiD· 1 shared Christiaan H. van Dorp· 1 shared Stijn P. AndewegiD· 1 shared

Activity by Year

2018-2020 · peak 1/yr

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3 top collaborators · 1 mutual co-author link

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1 shared paperBioinformatics

Bas E. DutilhORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintJan 14, 2020

Quantifying the impact of Human Leukocyte Antigen on the human gut microbiome

Stijn P. Andeweg, Can Keşmir, Bas E. Dutilh

This study investigates the association between HLA haplotype and gut microbiome composition using 3,002 public datasets, finding that similar HLA molecules correlate with similar microbiota and HLA homozygosity is linked to reduced microbiome diversity.

6 citations

humanmetagenomics

𝕏 PostBluesky

ImmunologybioRxivPreprintSep 4, 2018

Estimating HLA disease associations using similarity trees

Christiaan H. van Dorp, Can Keşmir

This paper introduces a Bayesian method that accounts for functional HLA similarities to estimate associations between HLA alleles and quantitative disease traits like HIV-1 viral load.

DOI 10.1101/408302

humanBayesian inference

𝕏 PostBluesky