Author

Alice Njeri Muchugi

World Agroforestry CentreORCID 0000-0002-8901-1376Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 3 Organism:plant (other)· 2 Research Focus:variant calling· 2 Organism:Drosophila· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

Allen Van DeynzeiD· 3 shared Prasad S. HendreiD· 3 shared Ramni JamnadassiD· 3 shared Robert KaribaiD· 3 shared Samuel MuthembaiD· 3 shared Bo SongiD· 2 shared Huan LiuiD· 2 shared Huanming YangiD· 2 shared

Activity by Year

2019-2022 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersGenomics

Allen Van DeynzeORCID

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3 papers

Recent·Most cited

Chromosome evolution and the genetic basis of agronomically important traits in greater yam

Jessen V. Bredeson, Jessica B. Lyons, Ibukun O. Oniyinde, Nneka R. Okereke, Olufisayo A. Kolade, Ikenna Nnabue, Christian O. Nwadili, Eva Hřibová, Matthew T Parker, Jeremiah Sunday Nwogha, Shengqiang Shu, Joseph W. Carlson, Robert Kariba, Samuel Muthemba, Katarzyna Knop, , Daniel S. Rokhsar

This paper presents a chromosome-scale genome assembly and genetic map for greater yam, identifies quantitative trait loci for disease and quality traits, and reveals domestication-related genetic patterns.

Nature Communications · Apr 14, 2022Peer-reviewedGenomics

Draft Genomes of two Artocarpus plants, Jackfruit (A. heterophyllus) and Breadfruit (A. altilis)

Sunil Kumar Sahu, Min Liu, Anna Yssel, Robert Kariba, Samuel Muthemba, Sanjie Jiang, Bo Song, Prasad S. Hendre, Alice Njeri Muchugi, Ramni Jamnadass, Shu-Min Kao, Jonathan Featherston, Nyree J. C. Zerega, Xun Xu, Huanming Yang, , Huan Liu

The paper presents high-quality draft genomes for jackfruit and breadfruit, revealing expanded gene families and insights into starch and sugar metabolism.

Genes · Dec 24, 2019Peer-reviewedGenomics

Draft genome sequence of the Solanum aethiopicum provides insights into disease resistance, drought tolerance and the evolution of the genome

Bo Song, Yue Song, Yuan Fu, Elizabeth Balyejusa Kizito, Sandra Ndagire Kamenya, Pamela Nahamya Kabod, Huan Liu, Samuel Muthemba, Robert Kariba, Joyce Njoki Njuguna, Solomon Maina, Francesca Stomeo, Appolinaire Djikeng, Prasad S. Hendre, Xiaoli Chen, , Xin Liu

The paper presents a draft genome of Solanum aethiopicum, identifies expanded resistance and drought tolerance genes, and identifies SNPs linked to these traits for breeding applications.

GigaScience · Oct 1, 2019Peer-reviewedGenomics