Author

Motoyuki Ashikari

Bioscience and Biotechnology Center, Nagoya UniversityORCID 0000-0002-8945-2366Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Approach:experimental assay· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Organism:plant (other)· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Tomoyuki FurutaiD· 2 shared Kazuyuki Doi· 1 shared Kshirod K Jena· 1 shared Stefan Reuscher· 1 shared Toshio YamamotoiD· 1 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 7 mutual co-author links

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2 shared papersBioinformatics

Tomoyuki FurutaORCID

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2 papers

Recent·Most cited

GBScleanR: Robust genotyping error correction using hidden Markov model with error pattern recognition.

Tomoyuki Furuta, Toshio Yamamoto, Motoyuki Ashikari

GBScleanR improves genotype accuracy by incorporating marker-specific error rates into a hidden Markov model for reduced-representation sequencing data.

Genetics · Mar 29, 2023Peer-reviewedBioinformatics

Adapting genotyping-by-sequencing for rice F2 populations.

Tomoyuki Furuta, Motoyuki Ashikari, Kshirod K Jena, Kazuyuki Doi, Stefan Reuscher

This paper develops a customized GBS pipeline for genotyping a highly heterozygous rice F2 population, generating SNP markers and a genetic map to identify QTLs for tiller number.

G3 Genes|Genomes|Genetics · Mar 1, 2017Peer-reviewedPlant Biology