Author

Shuqi Chen

Science for Life LaboratoryORCID 0000-0002-9018-5322Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Organism:human· 1 Organism:mouse· 1 Research Focus:software / tool· 1 Approach:statistical model· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Adil MardinoğluiD· 1 shared Alen LovrićiD· 1 shared Cheng ZhangiD· 1 shared Gholamreza BidkhoriiD· 1 shared Jens NielseniD· 1 shared Mathias UhléniD· 1 shared Rui BenfeitasiD· 1 shared Sunjae LeeiD· 1 shared

Activity by Year

2019-2019 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 28 mutual co-author links

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1 shared paperBioinformatics

Adil MardinoğluORCID

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1 paper

Recent·Most cited

RMetD2: a tool for integration of relative transcriptomics data into Genome-scale metabolic models

Cheng Zhang, Sunjae Lee, Gholamreza Bidkhori, Rui Benfeitas, Alen Lovrić, Shuqi Chen, Mathias Uhlén, Jens Nielsen, Adil Mardinoğlu

RMetD2 integrates differentially expressed genes into genome-scale metabolic models to reveal metabolic differences between conditions, outperforming existing methods in capturing experimentally observed features.

bioRxiv · Jun 6, 2019 · PreprintBioinformatics