Author

Guido Sauter

University Medical Center Hamburg-EppendorfORCID 0000-0002-9024-4978Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Research Focus:cell type annotation· 1 Research Focus:deconvolution· 1 Assay:DNA methylation· 1 Assay:imaging· 1 Approach:microscopy & imaging analysis· 1 Approach:transformer / foundation model· 1

Frequent Co-Authors

Karl Rohr· 2 shared Andrey Korshunov· 1 shared Clarissa GerhäuseriD· 1 shared David T Jones· 1 shared Holger Erfle· 1 shared Inn Chung· 1 shared Karsten Rippe· 1 shared Katharina I Deeg· 1 shared

Activity by Year

2016-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

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2 shared papersBioinformatics

Karl Rohr

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2 papers

Recent·Most cited

BioinformaticsNature CommunicationsPeer-reviewedJan 17, 2025

MethylBERT: A Transformer-based model for read-level DNA methylation pattern identification and tumour deconvolution

Yunhee Jeong, Clarissa Gerhäuser, Guido Sauter…·Pavlo Lutsik

MethylBERT is a Transformer-based model that identifies tumour-derived reads and estimates tumour purity from bulk samples, outperforming existing methods in accuracy.

20 citationstop 3%

humanDNA methylation

𝕏 PostBluesky

Cancer BiologybioRxivMay 12, 2016

Quantification of telomere features in tumor tissue sections by an automated 3D imaging-based workflow

Manuel Gunkel, Inn Chung, Stefan Worz…·Karsten Rippe

This paper introduces an automated 3D imaging workflow to quantify telomere features in tumor tissue sections, enabling reliable assessment of telomere heterogeneity and sub-populations.

DOI 10.1016/j.ymeth.2016.09.014

humanimaging

𝕏 PostBluesky