Author

Giovanni Scala

University of Naples Federico IIORCID 0000-0002-9037-1782Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:benchmarking· 2 Assay:bulk RNA-seq· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Research Focus:dimensionality reduction· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Angela SerraiD· 1 shared Antonella SarnataroiD· 1 shared Dario GrecoiD· 1 shared Emanuele CarosatiiD· 1 shared Gennaro MieleiD· 1 shared Giulia De RisoiD· 1 shared Harri Tapio AleniusiD· 1 shared Lorenzo ChiariottiiD· 1 shared

Activity by Year

2019-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperBioinformatics

Angela SerraORCID

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3 papers

Recent·Most cited

BioinformaticsBioinformaticsPeer-reviewedJul 1, 2023

MOViDA: Multi-Omics Visible Drug Activity Prediction with a Biologically Informed Neural Network Model

Luigi Ferraro, Giovanni Scala, Luigi Cerulo…·Michele Ceccarelli

This paper introduces a biologically informed neural network model for predicting drug sensitivity and synergy using multi-omics data, showing improved performance on imbalanced datasets.

13 citations

proteomicsmetagenomics

𝕏 PostBluesky

BioinformaticsbioRxivPreprintJul 6, 2022

MC profiling: a novel approach to analyze DNA methylation heterogeneity from bulk bisulfite sequencing data

Giulia De Riso, Antonella Sarnataro, Giovanni Scala…·Sergio Cocozza

The paper introduces MC profiling to analyze DNA methylation heterogeneity from bulk bisulfite sequencing data, revealing cell-to-cell differences and imprinting/X-inactivation signatures.

DOI 10.1101/2022.07.06.498979

DNA methylationstatistical model

𝕏 PostBluesky

BioinformaticsSource Code for Biology and MedicinePeer-reviewedJan 29, 2019

eUTOPIA: Solution for omics data preprocessing and analysis

Veer Singh Marwah, Giovanni Scala, Pia Kinaret…·Dario Greco

eUTOPIA provides an intuitive R Shiny application for preprocessing and analyzing microarray data without requiring computational expertise.

48 citations

bulk RNA-seqstatistical model

𝕏 PostBluesky