Author

Kashif A. Shaikh

University of PennsylvaniaORCID 0000-0002-9071-2057Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Alexis J. CombesiD· 1 shared Allison M. WeakleyiD· 1 shared Avneet Shaheed· 1 shared Brittany R. DavidsoniD· 1 shared Cecilia A. NoeckeriD· 1 shared Christina A. EkstrandiD· 1 shared Diana Marquez· 1 shared Elizabeth E. McCarthyiD· 1 shared

Activity by Year

2026-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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1 shared paperImmunology

Alexis J. CombesORCID

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1 paper

Recent·Most cited

ImmunologyCellPeer-reviewedMar 9, 2026

Coordinated variation in the immune systems and microbiomes of healthy humans is linked to tonic interferon states

Joël Babdor, Ravi K. Patel, Brittany R. Davidson…·Matthew H. Spitzer

The paper identifies coordinated variation between immune systems and microbiomes in healthy humans, linking it to tonic interferon states.

4 citationstop 3%

humanbulk RNA-seq

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