Author

Yao Nie

Roche (United States)ORCID 0000-0002-9147-7204Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:benchmark study· 1 Research Focus:cell type annotation· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Assay:imaging· 1

Frequent Co-Authors

Danial Maleki· 1 shared Nazim Shaikh· 1 shared Raghavan Venugopal· 1 shared Uday KurkureiD· 1 shared Xiao LiiD· 1 shared

Activity by Year

2025-2025 · peak 1/yr

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5 top collaborators · 10 mutual co-author links

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1 shared paperPathology

Danial Maleki

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1 paper

Recent·Most cited

Understanding Foundation Models in Digital Pathology: Performance, Trade-offs, and Model-Selection Recommendations

Danial Maleki, Nazim Shaikh, Xiao Li, Yao Nie, Raghavan Venugopal, Uday Kurkure

This study benchmarks five digital pathology foundation models across various tasks, showing that model size does not always correlate with performance, and recommends selecting models based on task-specific needs.

bioRxiv · Sep 12, 2025 · PreprintPathology