Author

Siyuan Ma

Nanyang Technological UniversityORCID 0000-0002-9207-1062Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioengineering· 1 Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:large language model· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:fluorescence / live-cell microscopy· 1 Assay:imaging· 1 Research Focus:imputation· 1 Research Focus:protein design· 1

Frequent Co-Authors

Dacheng TaoiD· 2 shared Haowei Wang· 2 shared Qixin ZhangiD· 2 shared Yang LiuiD· 2 shared Yi ChaiiD· 2 shared Guangyu WuiD· 1 shared Guiqin Liu· 1 shared HaoBo Sun· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Dacheng TaoORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintAug 30, 2026

RegimeFormer: A Large Protein Model of Global Perturbation Regimes

Siyuan Ma, Yi Chai, Yi Wu…·Dacheng Tao

RegimeFormer identifies protein perturbation regimes using a large-scale model and atlas, improving prediction accuracy and enabling downstream applications.

DOI 10.64898/2026.08.26.747182

protein sequencelarge language model

𝕏 PostBluesky

BioengineeringbioRxivPreprintAug 18, 2026

A cross-modal generative model for incomplete and degradedprostate MRI with multicentre clinical validation

Siyuan Ma, Liang He, Mengying Zhu…·Guangyu Wu

This paper develops MSCNet, a cross-modal generative model for reconstructing and restoring prostate MRI sequences, showing improved image quality and diagnostic performance in multicentre validation.

DOI 10.64898/2026.08.16.745066

imagingfluorescence / live-cell microscopy

𝕏 PostBluesky