Author

Giuseppe Defazio

University of Bari Aldo MoroORCID 0000-0002-9356-5224Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:metagenomics· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

Bruno FossoiD· 2 shared Anna Maria D’ErchiaiD· 1 shared Annarita OrangeriD· 1 shared Bérénice BatutiD· 1 shared Caterina ManzariiD· 1 shared Dominga Maio· 1 shared Elisabetta Notario· 1 shared Elisabetta PianconeiD· 1 shared

Activity by Year

2022-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 37 mutual co-author links

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2 shared papersBioinformatics

Bruno FossoORCID

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2 papers

Recent·Most cited

FAIRyMAGs - a series of FAIR Galaxy workflows for the generation of metagenome assembled genomes

Paul F. Zierep, Mina Ansari, Patrick Bühler, Santino Faack, Bruno Fosso, Giuseppe Defazio, Martín Beracochea, Santiago Sanchez, Hottmann Alexandra, Bérénice Batut

FAIRyMAGs provides a modular, FAIR-compliant Galaxy pipeline for generating and analyzing metagenome-assembled genomes, improving accessibility and reproducibility in genome-resolved metagenomics.

bioRxiv · Aug 5, 2026 · PreprintBioinformatics

Natural and after colon washing fecal samples: the two sides of the coin for investigating the human gut microbiome

Elisabetta Piancone, Bruno Fosso, Marinella Marzano, Mariangela De Robertis, Elisabetta Notario, Annarita Oranger, Caterina Manzari, Silvia Bruno, Grazia Visci, Giuseppe Defazio, Anna Maria D’Erchia, Ermes Filomena, Dominga Maio, Martina Minelli, Ilaria Vergallo, , Graziano Pesole

This study compares fecal and colonic lavage samples to assess their ability to represent the human gut microbiome, finding that colonic lavage reveals higher biodiversity and detects mucosa-associated microbes.

Scientific Reports · Oct 25, 2022Peer-reviewedMolecular Biology