Deep Nath

Discrete-time quantum walks reveal critical residues involved in long-range interactions in proteins

The paper uses discrete-time quantum walks to predict critical residues in proteins involved in long-range interactions, validated experimentally on AsLOV2.

Human prion proteins and mutants through the lens of systems biology

The paper uses network analysis, MD simulations, and experiments to identify critical residues in human PrP that affect structural stability and misfolding.

An ab initio information-theoretic approach to proteins and protein-ligand interactions

The paper introduces a novel information-theoretic method to analyze protein conformational changes and their functional implications across different states.

Assessing combinatorial diversity of aureochrome bZIPs through genome-wide screening

This study assesses the combinatorial diversity of aureochrome bZIPs by analyzing dimerization partners and stability using bioinformatics and network science methods.