Author

Samantha P. Beik

Vanderbilt UniversityORCID 0000-0002-9546-1656Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 2 Approach:Bayesian inference· 1 Assay:bulk RNA-seq· 1 Research Focus:cell-cell communication· 1 Research Focus:differential expression· 1 Organism:human· 1 Approach:statistical model· 1 Research Focus:trajectory inference· 1

Frequent Co-Authors

Carlos F. LopeziD· 2 shared Leonard A. HarrisiD· 2 shared Julien SageiD· 1 shared Lukas Daniel EinkemmeriD· 1 shared Martina PruggeriD· 1 shared Michael A. KocheniD· 1 shared Perry T. WasdiniD· 1 shared Vito QuarantaiD· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

8 top collaborators · 19 mutual co-author links

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2 shared papersSystems Biology

Carlos F. LopezORCID

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2 papers

Recent·Most cited

Unified Tumor Growth Mechanisms from Multimodel Inference and Dataset Integration

Samantha P. Beik, Leonard A. Harris, Michael A. Kochen, Julien Sage, Vito Quaranta, Carlos F. Lopez

The paper uses Bayesian multimodel inference to analyze tumor growth mechanisms in SCLC, finding that high lineage plasticity, not rare stem-like populations, drives tumor evolution.

PLoS Computational Biology · Jul 5, 2023Peer-reviewedSystems Biology

Unsupervised logic-based mechanism inference for network-driven biological processes

Martina Prugger, Lukas Daniel Einkemmer, Samantha P. Beik, Perry T. Wasdin, Leonard A. Harris, Carlos F. Lopez

This paper introduces an unsupervised logic-based method to infer mechanistic hypotheses of cellular processes from state transitions, recovering dynamics and biochemical species concentration changes.

PLoS Computational Biology · Jun 2, 2021Peer-reviewedSystems Biology