Author

Anna Cuscó

Fudan UniversityORCID 0000-0002-9574-5755Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Microbiology· 2 Bioinformatics· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:database / resource· 3 Assay:metagenomics· 3 Approach:experimental assay· 2 Research Focus:benchmarking· 1 Approach:deep learning· 1 Research Focus:ecology & biodiversity· 1 Assay:long-read sequencing· 1 Organism:multiple species· 1

Frequent Co-Authors

Luis Pedro CoelhoiD· 2 shared Yiqian DuaniD· 2 shared Alex ChklovskiiD· 1 shared Alexandre Areias CastroiD· 1 shared Armand SáncheziD· 1 shared Chengkai ZhuiD· 1 shared Fernando Gil· 1 shared Francesca Riva· 1 shared

Activity by Year

2017-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Luis Pedro CoelhoORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsbioRxivPreprintMar 21, 2026

Long-read metagenomic sequencing reveals novel lineages and functional diversity in urban soil microbiome

Yiqian Duan, Anna Cuscó, Yaozhong Zhang…·Luis Pedro Coelho

The paper uses long-read metagenomic sequencing to analyze urban soil samples, revealing novel microbial lineages and extensive functional diversity.

DOI 10.64898/2026.03.20.713087

metagenomicsexperimental assay

MicrobiologybioRxivPreprintSep 17, 2025

Capturing global pet dog gut microbial diversity and hundreds of near-finished bacterial genomes by using long-read metagenomics in a Shanghai cohort

Anna Cuscó, Yiqian Duan, Fernando Gil…·Luis Pedro Coelho

The paper uses long-read metagenomics to analyze pet dog gut microbiomes, generating high-quality MAGs and identifying antimicrobial resistance elements in a Shanghai cohort.

DOI 10.1101/2025.09.17.676595

multiple speciesmetagenomics

MicrobiologybioRxivPreprintJul 21, 2017

Using MinION to characterize dog skin microbiota through full-length 16S rRNA gene sequencing approach

Anna Cuscó, Joaquim Viñes, Sara D’Andreano…·Olga Francino

This paper evaluates MinION nanopore sequencing for full-length 16S rRNA gene sequencing of dog skin microbiota, showing improved taxonomic resolution compared to short-read sequencing.

DOI 10.1101/167015

metagenomicsexperimental assay