Author

Einar Holsbø

UiT The Arctic University of NorwayORCID 0000-0002-9728-2088Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 3

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Organism:E. coli· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Eiliv LundiD· 2 shared Lars Ailo BongoiD· 2 shared Anna Kaarina PöntineniD· 1 shared Bjørn FjukstadiD· 1 shared Corander JukkaiD· 1 shared Étienne BirmeléiD· 1 shared Hege Marie BøvelstadiD· 1 shared Knut Hansen· 1 shared

Activity by Year

2018-2026 · peak 1/yr

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10 top collaborators · 18 mutual co-author links

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2 shared papersBioinformatics

Eiliv LundORCID

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3 papers

Recent·Most cited

BioinformaticsMicrobial GenomicsPeer-reviewedJan 19, 2026

Machine learning based lineage prediction from AMR phenotypes for Escherichia coli ST131 clade C surveillance across infection types

Theodor A. Ross, Anna Kaarina Pöntinen, Einar Holsbø…·Rebecca A. Gladstone

This paper uses machine learning to predict the prevalence of ST131-C in UTIs and BSIs using antimicrobial susceptibility data, finding a link between UTI prevalence and BSI burden.

DOI 10.1099/mgen.0.001608

E. colibulk RNA-seq

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BioinformaticsbioRxivPreprintMay 21, 2019

Reproducible data management and analysis using R

Bjørn Fjukstad, Nikita Shvetsov, Therese Haugdahl Nøst…·Lars Ailo Bongo

The paper provides an R-based framework for reproducible data management and analysis in epidemiological studies using -omics data, with applications in the NOWAC study.

1 citation

humanbulk RNA-seq

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BioinformaticsbioRxivPreprintJun 25, 2018

Stratified time-course gene preselection shows a pre-diagnostic transcriptomic signal for metastasis in blood cells: a proof of concept from the NOWAC study

Einar Holsbø, Vittorio Perduca, Lars Ailo Bongo…·Étienne Birmelé

The paper shows that stratified time-course gene preselection improves prediction of metastasis in blood cells using NOWAC data.

1 citation

humanbulk RNA-seq

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