Author

Yasmine Maher Ahmed

University of PittsburghORCID 0000-0003-0130-4367Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 2 Approach:experimental assay· 1 Research Focus:software / tool· 1 Approach:statistical model· 1

Frequent Co-Authors

Nataša Miškov-ŽivanoviD· 2 shared Casey HanseniD· 1 shared Cheryl A. TelmeriD· 1 shared Emilee HoltzappleiD· 1 shared Gaoxiang ZhouiD· 1 shared Julia Kisslinger· 1 shared Neal Krishna· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

7 top collaborators · 13 mutual co-author links

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2 shared papersSystems Biology

Nataša Miškov-ŽivanovORCID

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2 papers

Recent·Most cited

Context-aware knowledge selection and reliable model recommendation with ACCORDION

Yasmine Maher Ahmed, Cheryl A. Telmer, Gaoxiang Zhou, Nataša Miškov-Živanov

ACCORDION selects relevant knowledge and recommends models by integrating literature retrieval, graph algorithms, and simulation, improving accuracy and reducing errors in biological systems.

Frontiers in Systems Biology · Apr 18, 2024Peer-reviewedSystems Biology

Classifying Literature Extracted Events for Automated Model Extension

Casey Hansen, Julia Kisslinger, Neal Krishna, Emilee Holtzapple, Yasmine Maher Ahmed, Nataša Miškov-Živanov

The paper integrates three tools to enhance automated model extension from literature, addressing issues like machine reading errors and high literature volume.

bioRxiv · Sep 30, 2021 · PreprintSystems Biology