Author

Daniel Standage

Indiana University BloomingtonORCID 0000-0003-0342-8531Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Assay:whole-genome sequencing· 3 Organism:human· 2 Approach:statistical model· 2 Research Focus:variant calling· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Research Focus:genome assembly· 1

Frequent Co-Authors

C. Titus BrowniD· 1 shared Fereydoun HormozdiariiD· 1 shared Rebecca Mitchell· 1 shared Tim LaiiD· 1 shared Volker BrendeliD· 1 shared

Activity by Year

2019-2022 · peak 1/yr

Co-Author Collaboration Network

5 top collaborators · 2 mutual co-author links

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1 shared paperBioinformatics

C. Titus BrownORCID

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3 papers

Recent·Most cited

GenomicsNAR Genomics and BioinformaticsPeer-reviewedJan 13, 2022

iLoci: Robust evaluation of genome content and organization for provisional and mature genome assemblies

Daniel Standage, Tim Lai, Volker Brendel

The paper introduces iLoci, a framework for evaluating genome content and organization, providing robust statistics for genome assemblies and annotations.

DOI 10.1093/nargab/lqac013

whole-genome sequencingstatistical model

𝕏 PostBluesky

GeneticsFrontiers in GeneticsPeer-reviewedAug 7, 2020

MicroHapDB: a portable and extensible database of all published microhaplotype marker and frequency data

Daniel Standage, Rebecca Mitchell

MicroHapDB compiles published microhaplotype marker and frequency data to aid in forensic DNA marker development and population studies.

35 citations

humanwhole-genome sequencing

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BioinformaticsiSciencePeer-reviewedJul 23, 2019

Kevlar: a mapping-free framework for accurate discovery of de novo variants

Daniel Standage, C. Titus Brown, Fereydoun Hormozdiari

Kevlar identifies de novo variants without mapping reads to a reference genome, achieving high sensitivity and specificity in simulated and real pedigrees.

28 citations

humanwhole-genome sequencing

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