Author

Mike D’Arcy

University of Southern CaliforniaORCID 0000-0003-0355-7157Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:database / resource· 3 Approach:statistical model· 3 Research Focus:benchmarking· 2 Assay:whole-genome sequencing· 2 Approach:benchmark study· 1 Assay:DNA methylation· 1 Organism:human· 1 Research Focus:software / tool· 1

Frequent Co-Authors

Carl KesselmaniD· 3 shared Ian T FosteriD· 3 shared Kyle ChardiD· 3 shared Ben HeavneriD· 2 shared Eric W. DeutschiD· 2 shared Gustavo GlusmaniD· 2 shared Nathan D. PriceiD· 2 shared Ravi MadduriiD· 2 shared

Activity by Year

2018-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 39 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersBioinformatics

Carl KesselmanORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

BioinformaticsGigaSciencePeer-reviewedJan 1, 2022

Making Common Fund data more Findable: Catalyzing a Data Ecosystem

Amanda L. Charbonneau, Arthur Brady, Karl Czajkowski…·Owen R. White

The paper describes the development of a metadata federation system for NIH Common Fund data to improve discoverability without data movement.

25 citations

statistical modeldatabase / resource

𝕏 PostBluesky

BioinformaticsPLoS ONEPeer-reviewedApr 11, 2019

Reproducible big data science: A case study in continuous FAIRness

Ravi Madduri, Kyle Chard, Mike D’Arcy…·Ian T Foster

The paper presents tools for ensuring FAIRness in big biomedical data analysis through a case study on creating a transcription factor binding site atlas from ENCODE data.

37 citationstop 3%

humanDNA methylation

𝕏 PostBluesky

BioinformaticsbioRxivPreprintFeb 2, 2018

BDQC: a general-purpose analytics tool for domain-blind validation of Big Data

Eric W. Deutsch, Roger Kramer, Joseph Ames…·Gustavo Glusman

BDQC identifies data outliers and anomalies in large-scale genomic pipelines without domain knowledge, improving data quality and enabling new insights.

7 citations

whole-genome sequencingstatistical model

𝕏 PostBluesky