Author

Ning Zhang

Central South UniversityORCID 0000-0003-0366-4657Unclaimed ORCID profile · follow to get notified of new preprints

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Ning Zhang4 papers · Cornell University

Biology Disciplines

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Bioinformatics· 2

Signature Assays, Organisms & Methods

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Organism:human· 2 Assay:spatial transcriptomics· 2 Research Focus:cell type annotation· 1 Approach:deep learning· 1 Approach:graph neural network· 1 Approach:large language model· 1 Organism:mouse· 1 Research Focus:spatial domain detection· 1

Frequent Co-Authors

Min LiiD· 2 shared Pengzhen Jia· 2 shared Siqi CheniD· 2 shared Yahui LongiD· 2 shared Jinmiao CheniD· 1 shared Sibo XiaiD· 1 shared Yichao ZhaoiD· 1 shared Yujie Jin· 1 shared

Activity by Year

2025-2025 · peak 2/yr

Co-Author Collaboration Network

9 top collaborators · 30 mutual co-author links

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2 shared papersBioinformatics

Min LiORCID

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2 papers

Recent·Most cited

Inferring spatial gene expression from tissue images using large-scale histology foundation model with SpaFoundation

Ning Zhang, Yahui Long, Sibo Xia, Pengzhen Jia, Yujie Jin, Siqi Chen, Jinmiao Chen, Min Li

This paper introduces SpaFoundation, a histology foundation model that predicts spatial gene expression from tissue images, showing strong performance in prediction and transferability.

bioRxiv · Aug 7, 2025 · PreprintBioinformatics

SpatialMap: A Scalable Deep Learning Method for Cell Typing in Subcellular Spatial Transcriptomics

Pengzhen Jia, Yahui Long, Yichao Zhao, Ning Zhang, Zhaoyu Fang, Siqi Chen, Min Li

SpatialMap is a deep learning method for cell typing in subcellular spatial transcriptomics that outperforms existing methods and identifies novel cell types.

bioRxiv · Jul 3, 2025 · PreprintBioinformatics