Author

Teodora Mateeva

Wellcome Sanger InstituteORCID 0000-0003-0368-5124Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Bioinformatics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:variant calling· 2 Assay:whole-genome sequencing· 2 Approach:deep learning· 1 Organism:human· 1 Approach:statistical model· 1

Frequent Co-Authors

John A. LeesiD· 2 shared Samuel HorsfieldiD· 2 shared Stephanie W. LoiD· 2 shared Stephen D. BentleyiD· 2 shared Alannah C. KingiD· 1 shared Alireza TajmirriahiiD· 1 shared Andrew John PollardiD· 1 shared Catherine SatzkeiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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2 shared papersBioinformatics

John A. LeesORCID

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2 papers

Recent·Most cited

BioinformaticsbioRxivPreprintOct 20, 2026

ALLCAPS: a scalable and accurate deep-learning method for in silico pneumococcal serotyping

Alireza Tajmirriahi, Teodora Mateeva, Matthew Russell…·Samuel Horsfield

ALLCAPS is a deep-learning tool for in silico pneumococcal serotyping that outperforms existing methods and identifies novel serotypes.

DOI 10.64898/2026.10.14.759107

whole-genome sequencingdeep learning

𝕏 PostBluesky

GenomicsbioRxivPreprintApr 7, 2026

Global population structure and phase variation of serotype 12F Streptococcus pneumoniae following the introduction of pneumococcal conjugate vaccine

Thi N M Huynh, Alannah C. King, Jason Chen Qixiang…·Stephanie W. Lo

This study characterizes the global population structure and genetic diversity of serotype 12F Streptococcus pneumoniae, identifying strand-slippage mutations as a mechanism for capsule variation and vaccine evasion.

1 citation

humanwhole-genome sequencing

𝕏 PostBluesky