Author

Sumit Mukherjee

National Institutes of HealthORCID 0000-0003-0382-450XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1 Approach:machine learning (classical)· 1 Research Focus:protein structure prediction· 1

Frequent Co-Authors

Alejandro A. SchäfferiD· 1 shared Danh-Tai HoangiD· 1 shared Edward Michael GertziD· 1 shared Eldad David ShulmaniD· 1 shared Emma M. CampagnoloiD· 1 shared Eytan RuppiniD· 1 shared Lipika R. PaliD· 1 shared Nishanth Ulhas NairiD· 1 shared

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2025-2025 · peak 1/yr

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1 shared paperCancer Biology

Alejandro A. SchäfferORCID

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1 paper

Recent·Most cited

Cancer BiologybioRxivPreprintOct 24, 2025

A machine learning framework for supervised treatment response prediction from tumor transcriptomics: A large-scale pan-cancer study

Lipika R. Pal, Edward Michael Gertz, Nishanth Ulhas Nair…·Eytan Ruppin

This paper develops a machine learning framework, EXPRESSO, to predict treatment response from tumor transcriptomics across multiple cancer types and therapies, showing improved performance over existing methods.

1 citation

humanbulk RNA-seq

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