Author

Jake R. Thomas

University of BonnORCID 0000-0003-0526-4470Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Organism:human· 2 Assay:scRNA-seq· 2 Research Focus:differential expression· 1 Assay:flow cytometry· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Jessica HaubiD· 2 shared Jiangyan YuiD· 2 shared A. Schlitzer· 1 shared Alina Hunecke· 1 shared Andreas SchlitzeriD· 1 shared B.E.F. Pregler· 1 shared C. Pizzaro· 1 shared Carmen PizarroiD· 1 shared

Activity by Year

2023-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 30 mutual co-author links

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2 shared papersImmunology

Jessica HaubORCID

Mutual co-authors in cluster

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2 papers

Recent·Most cited

ImmunologybioRxivPreprintMay 19, 2025

Human chronic inflammation is orchestrated by spatially restricted inflammation-activated Dendritic cells

Jake R. Thomas, Jessica Haub, Alina Hunecke…·A. Schlitzer

This study identifies a novel inflammation-associated dendritic cell state in human chronic inflammation and shows its spatial restriction and therapeutic relevance.

1 citation

humanscRNA-seq

𝕏 PostBluesky

ImmunologybioRxivPreprintDec 6, 2023

Early-stage idiopathic pulmonary fibrosis is characterized by bronchoalveolar accumulation of SPP1+ macrophages

Jiangyan Yu, Jake R. Thomas, Jessica Haub…·Andreas Schlitzer

This study identifies SPP1+ macrophages as early-stage biomarkers in idiopathic pulmonary fibrosis using single-cell transcriptomics and flow cytometry.

4 citations

humanscRNA-seq

𝕏 PostBluesky