Author

Cedric Gondro

Michigan State UniversityORCID 0000-0003-0666-656XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Genetics· 2 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Assay:whole-genome sequencing· 2 Research Focus:benchmarking· 1 Approach:diffusion model· 1 Research Focus:genome assembly· 1 Organism:plant (other)· 1 Research Focus:variant calling· 1 Research Focus:variant effect prediction· 1

Frequent Co-Authors

Juan Pedro SteibeliD· 2 shared Aamir Bashir· 1 shared Akansha SinghiD· 1 shared Amit KumariD· 1 shared Andrea RomeroiD· 1 shared Arnav MehrotraiD· 1 shared Ashwni Kumar PandeyiD· 1 shared Athikkattuvalasu S. Karthikeyan· 1 shared

Activity by Year

2020-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Juan Pedro SteibelORCID

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3 papers

Recent·Most cited

Nucleotide resolution genetic mapping in pigs by publicly accessible whole genome imputation

Rongrong Ding, Rodrigo Pelicioni Savegnago, Jinding Liu, Nanye Long, Cheng Peow Bobby Tan, Gengyuan Cai, Zhanwei Zhuang, Jie Wu, Ming Yu Yang, Yibin Qiu, Donglin Ruan, Jianping Quan, Enqin Zheng, Linjun Hong, Zicong Li, , Zhenfang Wu

This study improves genetic mapping resolution in pigs by developing a high-density haplotype reference panel and a public imputation server.

bioRxiv · May 18, 2022 · PreprintGenomics

Heuristic hyperparameter optimization of deep learning models for genomic prediction

Junjie Han, Cedric Gondro, Kenneth N. Reid, Juan Pedro Steibel

This paper optimizes deep learning hyperparameters for genomic prediction using differential evolution, showing improved performance and reduced overfitting across livestock datasets.

G3 Genes Genomes Genetics · Feb 6, 2021Peer-reviewedGenetics

Signature of selection in composite Vrindavani cattle of India

Akansha Singh, Arnav Mehrotra, Cedric Gondro, Andrea Romero, Ashwni Kumar Pandey, Athikkattuvalasu S. Karthikeyan, Aamir Bashir, Bina Mishra, Triveni Dutt, Amit Kumar

This study identifies selection signatures in the Vrindavani cattle genome, finding stronger selective pressure on adaptation-related regions than milk yield.

Frontiers in Genetics · Dec 18, 2020Peer-reviewedGenetics