Author

Wenwen Zhang

Chinese Academy of SciencesORCID 0000-0003-1285-3118Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:differential expression· 2 Research Focus:gene regulatory network inference· 2 Organism:human· 2 Assay:ATAC-seq· 1 Assay:bulk RNA-seq· 1 Approach:deep learning· 1 Assay:Hi-C· 1 Approach:machine learning (classical)· 1

Frequent Co-Authors

Dongmei HaniD· 2 shared Xuan LiangiD· 2 shared Yuanyuan MiaoiD· 2 shared Yurun Li· 2 shared Zhen WangiD· 1 shared Zhen WangiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

6 top collaborators · 14 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersBioinformatics

Dongmei HanORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

BioinformaticsAdvanced SciencePeer-reviewedOct 28, 2026

XChrom: a cross-cell chromatin accessibility prediction model integrating genomic sequence and cellular context

Yuanyuan Miao, Xuan Liang, Wenwen Zhang…·Zhen Wang

XChrom predicts chromatin accessibility across cells and genomic regions using genomic sequence and cell identity, outperforming existing methods and enabling cross-species analysis.

1 citation

humanATAC-seq

𝕏 PostBluesky

BioinformaticsNucleic Acids ResearchPeer-reviewedApr 23, 2026

Predicting enhancer-gene links from single-cell multi-omics data by integrating prior Hi-C information

Xuan Liang, Yuanyuan Miao, Dongmei Han…·Zhen Wang

This paper introduces SCEG-HiC, a machine learning method that predicts enhancer-gene links using single-cell multi-omics data and Hi-C prior knowledge, showing improved performance over existing models.

DOI 10.1093/nar/gkag437

humanmouse

𝕏 PostBluesky