Author
Rochester Institute of TechnologyORCID 0000-0003-1495-2953Unclaimed ORCID profile · follow to get notified of new preprints
3 papers
Recent·Most cited
Suresh Pokharel, Bishnu Bhusal
The paper introduces a framework for multi-type PTM site prediction using protein language model embeddings, achieving improved performance in a shared-model setting.
Pawel Pratyush, Callen Carrier, Suresh Pokharel…·Dukka B. KC
CaLMPhosKAN predicts phosphorylation sites by combining codon and amino acid embeddings with a wavelet-based KAN model, outperforming existing methods on independent test sets.
Suresh Pokharel, Kepha Barasa, Pawel Pratyush, Dukka B. KC
The paper develops pLM-DBPs, a tool for predicting DNA-binding proteins in plants using protein language model embeddings, achieving 83.8% MCC on an independent test set.