Author

Lin Yang

University of ChicagoORCID 0000-0003-1898-8558Unclaimed ORCID profile · follow to get notified of new preprints

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Lin Yang4 papers · Columbia University

Biology Disciplines

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Signature Assays, Organisms & Methods

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Assay:DNA methylation· 2 Approach:experimental assay· 2 Research Focus:gene regulatory network inference· 2 Organism:plant (other)· 2 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Approach:statistical model· 1

Frequent Co-Authors

Abraham Morales‐CruziD· 2 shared Chris G. DaumiD· 2 shared Leo A. BaumgartiD· 2 shared Peng WangiD· 2 shared Ronan C. O’MalleyiD· 2 shared Sharon I. GreenblumiD· 2 shared Yu ZhangiD· 2 shared Alexis GarretsoniD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

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10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Abraham Morales‐CruzORCID

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2 papers

Recent·Most cited

GenomicsNature CommunicationsPeer-reviewedAug 4, 2026

Positional grammar of transcription factor binding partitions developmental and stress-response regulation in plants

Abraham Morales‐Cruz, Sharon I. Greenblum, Peng Wang…·Ronan C. O’Malley

The paper investigates how transcription factor binding site position and chromatin context influence gene regulation in plants, revealing distinct regulatory roles for different genomic locations.

DOI 10.1038/s41467-026-75947-0

plant (other)DNA methylation

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GenomicsNature PlantsPeer-reviewedJul 15, 2025

Recruitment, rewiring, and deep conservation in flowering plant gene regulation

Leo A. Baumgart, Sharon I. Greenblum, Abraham Morales‐Cruz…·Ronan C. O’Malley

The paper presents a scalable TFBS assay to create an atlas of 3,000 genome-wide binding site maps for 360 TFs across 10 flowering plant species, revealing conservation and rewiring of regulatory elements.

42 citationstop 1%

plant (other)DNA methylation

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