Author

Claudio Cucini

University of SienaORCID 0000-0003-1918-0702Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:phylogenetics / evolution· 2 Approach:statistical model· 2 Approach:Bayesian inference· 1 Approach:deep learning· 1 Assay:DNA methylation· 1 Assay:protein structure· 1

Frequent Co-Authors

Edmund R. R. MoodyiD· 1 shared Francesco CicconardiiD· 1 shared Francesco NardiiD· 1 shared Joan PonsiD· 1 shared Stephen Hugh MontgomeryiD· 1 shared

Activity by Year

2026-2026 · peak 2/yr

Co-Author Collaboration Network

5 top collaborators · 4 mutual co-author links

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1 shared paperEvolutionary Biology

Edmund R. R. MoodyORCID

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2 papers

Recent·Most cited

Evolutionary BiologybioRxivPreprintJul 9, 2026

Ancient Rapid Radiation Underlies Persistent Phylogenomic Conflict in Early Collembola Diversification

Claudio Cucini, Edmund R. R. Moody, Stephen Hugh Montgomery, Francesco Cicconardi

This study resolves phylogenetic conflicts in Collembola by showing ancient rapid radiation and incomplete lineage sorting, supporting Poduromorpha as the earliest-diverging lineage.

DOI 10.64898/2026.07.05.736609

DNA methylationstatistical model

𝕏 PostBluesky

Evolutionary BiologySystematic BiologyPeer-reviewedMar 9, 2026

Integrating Secondary Structure Information Enhances Phylogenetic Signal in Mitochondrial Protein Coding Genes

Claudio Cucini, Francesco Nardi, Joan Pons

The paper improves phylogenetic analysis of mitochondrial protein coding genes by integrating secondary structure information using a new pipeline called TRAMPO.

1 citation

protein structuredeep learning

𝕏 PostBluesky